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    C5h1orf210 similar to human chromosome 1 open reading frame 210 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 362576, updated on 9-Dec-2024

    Summary

    Official Symbol
    C5h1orf210provided by RGD
    Official Full Name
    similar to human chromosome 1 open reading frame 210provided by RGD
    Primary source
    RGD:1305347
    See related
    EnsemblRapid:ENSRNOG00000020259 AllianceGenome:RGD:1305347
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1305347
    Summary
    Orthologous to human C1orf210 (chromosome 1 open reading frame 210). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 212.7), Liver (RPKM 53.5) and 1 other tissue See more
    Orthologs
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    Genomic context

    See C5h1orf210 in Genome Data Viewer
    Location:
    5q36
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (137334142..137337300)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (132048755..132051913)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (137356777..137360636)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 258 like 2 Neighboring gene ribosomal protein S5, pseudogene 1 Neighboring gene cilia and flagella associated protein 57 Neighboring gene EBNA1 binding protein 2

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    type III endosome membrane protein TEMP

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001108674.2NP_001102144.1  type III endosome membrane protein TEMP

      See identical proteins and their annotated locations for NP_001102144.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000005
      UniProtKB/TrEMBL
      A6JZJ0, D3ZJJ3
      Related
      ENSRNOP00000075988.1, ENSRNOT00000092813.3
      Conserved Domains (1) summary
      pfam15176
      Location:1898
      LRR19-TM; Leucine-rich repeat family 19 TM domain
    2. NM_001419490.1NP_001406419.1  type III endosome membrane protein TEMP

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000005
      UniProtKB/TrEMBL
      A6JZJ0, D3ZJJ3

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      137334142..137337300
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)