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    Atxn7l3b ataxin 7-like 3B [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100192313, updated on 9-Dec-2024

    Summary

    Symbol
    Atxn7l3bprovided by RGD
    Full Name
    ataxin 7-like 3Bprovided by RGD
    Primary source
    RGD:2301984
    See related
    EnsemblRapid:ENSRNOG00000083408 AllianceGenome:RGD:2301984
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be involved in regulation of gene expression. Predicted to be located in cytoplasm. Orthologous to human ATXN7L3B (ataxin 7 like 3B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Atxn7l3b in Genome Data Viewer
    Location:
    7q22
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (50208666..50212190, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (48322451..48325975, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (55600879..55604403, complement)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134479688 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC134479689 Neighboring gene uncharacterized LOC134479690

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RGD

    Process Evidence Code Pubs
    involved_in regulation of gene expression  
    involved_in regulation of gene expression  
    Component Evidence Code Pubs
    located_in cytoplasm  

    General protein information

    Preferred Names
    ataxin-7-like protein 3B
    Names
    putative ataxin-7-like protein 3B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001136261.1NP_001129733.1  ataxin-7-like protein 3B

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000007
      UniProtKB/TrEMBL
      D3ZFQ1
      Related
      ENSRNOP00000098749.1, ENSRNOT00000127483.1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      50208666..50212190 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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