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    Srd5a2 steroid 5 alpha-reductase 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 64677, updated on 9-Dec-2024

    Summary

    Official Symbol
    Srd5a2provided by RGD
    Official Full Name
    steroid 5 alpha-reductase 2provided by RGD
    Primary source
    RGD:621480
    See related
    EnsemblRapid:ENSRNOG00000027042 AllianceGenome:RGD:621480
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    S5AR 2
    Summary
    Enables 3-oxo-5-alpha-steroid 4-dehydrogenase activity and amide binding activity. Involved in several processes, including androgen biosynthetic process; limbic system development; and reproductive structure development. Located in cell body fiber and neuronal cell body. Biomarker of diabetes mellitus and hyperprolactinemia. Human ortholog(s) of this gene implicated in hypospadias and prostate cancer. Orthologous to human SRD5A2 (steroid 5 alpha-reductase 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 1.5), Testes (RPKM 1.2) and 3 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Srd5a2 in Genome Data Viewer
    Location:
    6q13
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (27178089..27217588)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (21426225..21465727)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (25279635..25315501, complement)

    Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene high mobility group box 2, pseudogene 4 Neighboring gene PYM homolog 1, exon junction complex associated factor, pseudogene 1 Neighboring gene uncharacterized LOC134479328 Neighboring gene small nucleolar RNA SNORA48 Neighboring gene splicing factor 3B subunit 4, pseudogene 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables 3-oxo-5-alpha-steroid 4-dehydrogenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables 3-oxo-5-alpha-steroid 4-dehydrogenase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables 3-oxo-5-alpha-steroid 4-dehydrogenase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables 3-oxo-5alpha-steroid 4-dehydrogenase (NADP+) activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables amide binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables testosterone dehydrogenase [NAD(P)+] activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables testosterone dehydrogenase [NAD(P)+] activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in androgen biosynthetic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within androgen biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in androgen biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in androgen metabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in androgen metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in biphenyl metabolic process IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in bone development IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in dibenzo-p-dioxin metabolic process IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in female genitalia development IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in hippocampus development IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in hypothalamus development IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in male genitalia development IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    acts_upstream_of_or_within male genitalia development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in male genitalia development TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in male gonad development IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in male gonad development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in phthalate metabolic process IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to biphenyl IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in response to follicle-stimulating hormone IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to nutrient levels IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to organic cyclic compound IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to peptide hormone IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in response to steroid hormone IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to testosterone IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to xenobiotic stimulus IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in sex differentiation TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in steroid biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in steroid biosynthetic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within steroid biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in steroid catabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in testosterone biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in testosterone biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in cell body fiber IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in neuronal cell body IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    3-oxo-5-alpha-steroid 4-dehydrogenase 2
    Names
    5 alpha-SR2
    SR type 2
    steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)
    NP_073202.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_022711.5NP_073202.1  3-oxo-5-alpha-steroid 4-dehydrogenase 2

      See identical proteins and their annotated locations for NP_073202.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000006
      UniProtKB/Swiss-Prot
      P31214
      UniProtKB/TrEMBL
      A6H9Z5
      Related
      ENSRNOP00000108368.1, ENSRNOT00000170207.1
      Conserved Domains (1) summary
      pfam02544
      Location:105254
      Steroid_dh; 3-oxo-5-alpha-steroid 4-dehydrogenase

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086024.1 Reference GRCr8

      Range
      27178089..27217588
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)