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    LOC102557529 uncharacterized LOC102557529 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 102557529, updated on 17-Aug-2024

    Summary

    Symbol
    LOC102557529provided by RGD
    Full Name
    uncharacterized LOC102557529provided by RGD
    Primary source
    RGD:7613436
    See related
    AllianceGenome:RGD:7613436
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Spleen (RPKM 24.8) and Thymus (RPKM 1.3) See more
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    Genomic context

    See LOC102557529 in Genome Data Viewer
    Location:
    10q26
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (73599588..73610150)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (73102262..73112961)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (75632462..75642992)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein S23 Neighboring gene coiled-coil domain containing 182 Neighboring gene uncharacterized LOC134480852 Neighboring gene musashi RNA-binding protein 2 Neighboring gene uncharacterized LOC134480853

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      73599588..73610150
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_005490413.2 RNA Sequence

    2. XR_005490412.2 RNA Sequence

    3. XR_005490410.2 RNA Sequence

    4. XR_005490411.2 RNA Sequence

    5. XR_005490409.2 RNA Sequence

    6. XR_010055733.1 RNA Sequence

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