Yae1 YAE1 maturation factor of ABCE1 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Yae1provided by RGD
Official Full Name: YAE1 maturation factor of ABCE1provided by RGD
Primary source: RGD:1306613
See related: EnsemblRapid:ENSRNOG00000013438 AllianceGenome:RGD:1306613
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Yae1d1; RGD1306613
Summary: Predicted to be involved in protein maturation by [4Fe-4S] cluster transfer. Predicted to be located in cytoplasm and nucleus. Orthologous to human YAE1 (YAE1 maturation factor of ABCE1). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Biased expression in Heart (RPKM 171.7), Kidney (RPKM 121.6) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 17q11

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	17	NC_086035.1 (51722582..51729098)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	17	NC_051352.1 (47027033..47033549)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	17	NC_005116.4 (49610548..49617065)

Chromosome 17 - NC_086035.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH142877 (e-PCR)
- UniSTS:232124

RH130433 (e-PCR)
- UniSTS:213717

Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in protein maturation by [4Fe-4S] cluster transfer	ISO Inferred from Sequence Orthology more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: protein YAE1 homolog

Names: YAE1, ABCE1 maturation factor; Yae1 domain containing 1; yae1 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.