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    LOC286297 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like pseudogene [ Homo sapiens (human) ]

    Gene ID: 286297, updated on 10-Dec-2024

    Summary

    Gene symbol
    LOC286297
    Gene description
    methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like pseudogene
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in fat (RPKM 9.7), testis (RPKM 0.9) and 1 other tissue See more
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    Genomic context

    See LOC286297 in Genome Data Viewer
    Location:
    9q13
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (63112403..63127100, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (67017375..67032072, complement)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107987003 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:66970692-66971556 Neighboring gene BMS1 pseudogene 9 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:66990095-66990919 Neighboring gene uncharacterized LOC105379814 Neighboring gene aquaporin 7 pseudogene 4 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:67068313-67068818 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:67284594-67285094 Neighboring gene methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like pseudogene Neighboring gene aquaporin 7 pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_046175.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK097152, AL591379

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

      Range
      63112403..63127100 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)