U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Rgs9 regulator of G-protein signaling 9 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 29481, updated on 9-Dec-2024

    Summary

    Official Symbol
    Rgs9provided by RGD
    Official Full Name
    regulator of G-protein signaling 9provided by RGD
    Primary source
    RGD:3572
    See related
    EnsemblRapid:ENSRNOG00000003800 AllianceGenome:RGD:3572
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Enables GTPase activator activity. Involved in several processes, including G protein-coupled dopamine receptor signaling pathway; regulation of monoatomic ion transmembrane transport; and response to estradiol. Predicted to be located in membrane. Predicted to be active in several cellular components, including glutamatergic synapse; neuron projection; and synaptic membrane. Biomarker of Parkinsonism. Human ortholog(s) of this gene implicated in bradyopsia 1. Orthologous to human RGS9 (regulator of G protein signaling 9). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Brain (RPKM 77.9), Uterus (RPKM 17.8) and 3 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Rgs9 in Genome Data Viewer
    Location:
    10q32.1
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (94696556..94770387, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (94195265..94270892, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (97509971..97582188, complement)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L10A, pseudogene 5 Neighboring gene macrophage migration inhibitory factor like 4 Neighboring gene uncharacterized LOC102550782 Neighboring gene uncharacterized LOC120095203 Neighboring gene uncharacterized LOC102550846

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables GTPase activator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables GTPase activator activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled dopamine receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in G protein-coupled dopamine receptor signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within dark adaptation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within light adaption ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in nervous system development IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in positive regulation of NMDA glutamate receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of G protein-coupled receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of calcium ion export across plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in response to amphetamine IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to estradiol IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in visual perception IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in glutamatergic synapse ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in neuron projection IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in postsynaptic density membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in presynaptic membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    regulator of G-protein signaling 9

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_019224.2NP_062097.1  regulator of G-protein signaling 9

      See identical proteins and their annotated locations for NP_062097.1

      Status: PROVISIONAL

      Source sequence(s)
      AB019145
      UniProtKB/Swiss-Prot
      P49805
      UniProtKB/TrEMBL
      A0A8I5ZNC0, A6HKA1
      Related
      ENSRNOP00000005076.7, ENSRNOT00000005076.8
      Conserved Domains (3) summary
      smart00224
      Location:219280
      GGL; G protein gamma subunit-like motifs
      cd08739
      Location:292412
      RGS_RGS9; Regulator of G protein signaling (RGS) domain found in the RGS9 protein
      cd04450
      Location:22109
      DEP_RGS7-like; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in RGS (regulator of G-protein signaling) proteins of the subfamily R7. This subgroup contains RGS7, RGS6, RGS9 and RGS11. They share a common domain architecture, containing, beside the RGS domain, ...

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      94696556..94770387 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)