U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    GOLGA6FP golgin A6 family member F, pseudogene [ Homo sapiens (human) ]

    Gene ID: 645752, updated on 10-Dec-2024

    Summary

    Official Symbol
    GOLGA6FPprovided by HGNC
    Official Full Name
    golgin A6 family member F, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:49206
    See related
    AllianceGenome:HGNC:49206
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in testis (RPKM 4.3) and ovary (RPKM 0.2) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See GOLGA6FP in Genome Data Viewer
    Location:
    15q24.3
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (77914217..77926846, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (75776440..75789072, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (78206559..78219188, complement)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:78171267-78171767 Neighboring gene chondroitin sulfate proteoglycan 4 pseudogene 13 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:78180036-78180778 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:78196402-78196966 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:78196967-78197531 Neighboring gene uncharacterized LOC124903533 Neighboring gene dynamin 1 pseudogene 9 Neighboring gene RNA, 7SL, cytoplasmic 214, pseudogene Neighboring gene Sharpr-MPRA regulatory region 89 Neighboring gene COMM domain containing 4 pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:78243991-78244491 Neighboring gene Sharpr-MPRA regulatory region 9982 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr15:78252702-78253247 Neighboring gene ADAMTS7 pseudogene 3 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6700 Neighboring gene uncharacterized LOC91450

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    General gene information

    Other Names

    • golgi autoantigen, golgin subfamily a, 6 pseudogene
    • golgin A6 family member A pseudogene

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_027024.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC104758

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

      Range
      77914217..77926846 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060939.1 Alternate T2T-CHM13v2.0

      Range
      75776440..75789072 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)