U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    BICDL3P BICD family like 3, pseudogene [ Homo sapiens (human) ]

    Gene ID: 171022, updated on 10-Dec-2024

    Summary

    Official Symbol
    BICDL3Pprovided by HGNC
    Official Full Name
    BICD family like 3, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:18289
    See related
    MIM:612545; AllianceGenome:HGNC:18289
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    WBSCR26; LINC00035; ABHD11-AS1; NCRNA00035
    Expression
    Biased expression in duodenum (RPKM 11.3), small intestine (RPKM 9.7) and 5 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See BICDL3P in Genome Data Viewer
    Location:
    7q11.23
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (73735069..73736000)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (74935968..74936899)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (73149399..73150330)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene syntaxin 1A Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:73129777-73130308 Neighboring gene microRNA 4284 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18261 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18262 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18263 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18264 Neighboring gene Sharpr-MPRA regulatory region 8580 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26129 Neighboring gene RNA, 7SL, cytoplasmic 265, pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:73152931-73153588 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:73153589-73154245 Neighboring gene abhydrolase domain containing 11 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:73156848-73158047 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:73175993-73176570 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:73176571-73177148 Neighboring gene claudin 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Other Names

    • ABHD11 antisense RNA 1 (non-protein coding)
    • ABHD11 antisense RNA 1 (tail to tail)
    • Williams Beuren syndrome chromosome region 26 (non-protein coding)
    • long intergenic non-protein coding RNA 35

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_026690.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC073846, CV575750

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      73735069..73736000
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      74935968..74936899
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)