Tmem233 transmembrane protein 233 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Tmem233provided by RGD
Official Full Name: transmembrane protein 233provided by RGD
Primary source: RGD:1597489
See related: EnsemblRapid:ENSRNOG00000053974 AllianceGenome:RGD:1597489
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Predicted to be located in plasma membrane. Predicted to be active in membrane. Orthologous to human TMEM233 (transmembrane protein 233). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Restricted expression toward (RPKM 292.2) See more
Orthologs: human mouse all
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Genomic context

Location:: 12q16

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	12	NC_086030.1 (46189247..46230434)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	12	NC_051347.1 (40528515..40569611)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	12	NC_005111.4 (46287405..46297570)

Chromosome 12 - NC_086030.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Component	Evidence Code	Pubs
is_active_in membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in plasma membrane	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: transmembrane protein 233

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001398920.1 → NP_001385849.1 transmembrane protein 233

Status: VALIDATED

Source sequence(s)

BI296440, CB585279

UniProtKB/TrEMBL

A0A8I6AT25, A6J1R0

Related

ENSRNOP00000073438.3, ENSRNOT00000083569.3

Conserved Domains (1) summary

pfam04505
Location:60 → 115

CD225; Interferon-induced transmembrane protein