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    Lhb luteinizing hormone subunit beta [ Rattus norvegicus (Norway rat) ]

    Gene ID: 25329, updated on 9-Dec-2024

    Summary

    Official Symbol
    Lhbprovided by RGD
    Official Full Name
    luteinizing hormone subunit betaprovided by RGD
    Primary source
    RGD:3006
    See related
    EnsemblRapid:ENSRNOG00000063034 AllianceGenome:RGD:3006
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable hormone activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within luteinizing hormone signaling pathway involved in ovarian follicle development. Predicted to be active in cytoplasm and extracellular space. Human ortholog(s) of this gene implicated in hypogonadotropic hypogonadism 23 with or without anosmia. Orthologous to several human genes including LHB (luteinizing hormone subunit beta). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 54.0), Lung (RPKM 27.2) and 8 other tissues See more
    Orthologs
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    Genomic context

    See Lhb in Genome Data Viewer
    Location:
    1q22
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (105037457..105038446)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (95898269..95901973)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (101409992..101413725)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel subfamily A member 7 Neighboring gene neurotrophin 4 Neighboring gene stabilizer of axonemal microtubules 3 Neighboring gene RuvB-like AAA ATPase 2 Neighboring gene glycogen synthase 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables hormone activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    lutropin subunit beta
    Names
    LH-B
    LSH-B
    LSH-beta
    Luteinizing hormone (lutropin) subunit beta
    luteinizing hormone beta polypeptide
    luteinizing hormone beta subunit
    lutropin beta chain

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033975.1NP_001029147.1  lutropin subunit beta isoform 2 precursor

      See identical proteins and their annotated locations for NP_001029147.1

      Status: VALIDATED

      Source sequence(s)
      BG379148, CB812721, D00576
      UniProtKB/TrEMBL
      Q62778
      Conserved Domains (1) summary
      smart00068
      Location:23129
      GHB; Glycoprotein hormone beta chain homologues
    2. NM_012858.2NP_036990.1  lutropin subunit beta isoform 1 precursor

      See identical proteins and their annotated locations for NP_036990.1

      Status: VALIDATED

      Source sequence(s)
      BG379148, CB566905, V01542
      UniProtKB/Swiss-Prot
      P01230
      UniProtKB/TrEMBL
      A0A0A0MY50, Q62778
      Related
      ENSRNOP00000060360.3, ENSRNOT00000067468.5
      Conserved Domains (1) summary
      smart00068
      Location:25131
      GHB; Glycoprotein hormone beta chain homologues

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      105037457..105038446
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)