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    Acrv1 acrosomal vesicle protein 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 60353, updated on 9-Dec-2024

    Summary

    Official Symbol
    Acrv1provided by RGD
    Official Full Name
    acrosomal vesicle protein 1provided by RGD
    Primary source
    RGD:620153
    See related
    EnsemblRapid:ENSRNOG00000008508 AllianceGenome:RGD:620153
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Sp10
    Summary
    Predicted to be located in acrosomal vesicle. Orthologous to human ACRV1 (acrosomal vesicle protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward (RPKM 290.6) See more
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    Genomic context

    See Acrv1 in Genome Data Viewer
    Location:
    8q22
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (44593246..44598823)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (36404394..36409971)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (39164991..39170568)

    Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene prostate and testis expressed 14 like 3 Neighboring gene secreted seminal-vesicle Ly-6 protein 1-like 1 Neighboring gene checkpoint kinase 1 Neighboring gene STT3 oligosaccharyltransferase complex catalytic subunit A

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in acrosomal vesicle  

    General protein information

    Preferred Names
    acrosomal protein SP-10
    Names
    sperm protein 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_021747.1 → NP_068515.1  acrosomal protein SP-10 precursor

      See identical proteins and their annotated locations for NP_068515.1

      Status: PROVISIONAL

      Source sequence(s)
      AJ243484
      UniProtKB/TrEMBL
      A0A8I6A9C9, A6KRN3, F7FIQ9, Q9WUY6
      Related
      ENSRNOP00000011309.1, ENSRNOT00000011309.5
      Conserved Domains (1) summary
      cd00117
      Location:191 → 267
      LU; Ly-6 antigen / uPA receptor -like domain; occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family,CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. Topology of these ...

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086026.1 Reference GRCr8

      Range
      44593246..44598823
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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