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    C8h11orf97 similar to human chromosome 11 open reading frame 97 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 500945, updated on 9-Dec-2024

    Summary

    Official Symbol
    C8h11orf97provided by RGD
    Official Full Name
    similar to human chromosome 11 open reading frame 97provided by RGD
    Primary source
    RGD:1561795
    See related
    EnsemblRapid:ENSRNOG00000009203 AllianceGenome:RGD:1561795
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1561795
    Summary
    Predicted to be located in ciliary basal body. Predicted to be active in ciliary base. Orthologous to human C11orf97 (chromosome 11 open reading frame 97). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 99.5), Adrenal (RPKM 23.6) and 1 other tissue See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See C8h11orf97 in Genome Data Viewer
    Location:
    8q12
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (19884682..19901931, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (11603225..11618729, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (13275270..13292587, complement)

    Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120094082 Neighboring gene fucosyltransferase 4 Neighboring gene MRE11 homolog, double strand break repair nuclease Neighboring gene ankyrin repeat domain 49 Neighboring gene G protein-coupled receptor 83

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RGD

    Process Evidence Code Pubs
    NOT involved_in cilium assembly ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in ciliary basal body ISO
    Inferred from Sequence Orthology
    more info
     
    located_in ciliary basal body ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in ciliary base IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in ciliary base ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein C11orf97 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109289.1NP_001102759.1  uncharacterized protein C11orf97 homolog

      See identical proteins and their annotated locations for NP_001102759.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473993
      UniProtKB/TrEMBL
      A0A5H1ZRU2
      Related
      ENSRNOP00000105459.1, ENSRNOT00000146183.1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086026.1 Reference GRCr8

      Range
      19884682..19901931 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063265959.1XP_063122029.1  uncharacterized protein C11orf97 homolog isoform X1

      UniProtKB/Swiss-Prot
      D3ZF18