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    Mb21d2 Mab-21 domain containing 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 498100, updated on 9-Dec-2024

    Summary

    Official Symbol
    Mb21d2provided by RGD
    Official Full Name
    Mab-21 domain containing 2provided by RGD
    Primary source
    RGD:1559643
    See related
    EnsemblRapid:ENSRNOG00000024040 AllianceGenome:RGD:1559643
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1559643
    Summary
    Orthologous to human MB21D2 (Mab-21 domain containing 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 53.3), Brain (RPKM 52.4) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Mb21d2 in Genome Data Viewer
    Location:
    11q22
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (85330526..85429543)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (71825748..71924770)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (75434198..75533476)

    Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene phospholipase A and acyltransferase 1 Neighboring gene CYLD lysine 63 deubiquitinase, pseudogene 2 Neighboring gene 60S ribosomal protein L26-like 1 pseudogene Neighboring gene fibroblast growth factor 12 Neighboring gene uncharacterized LOC134481099

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    nucleotidyltransferase MB21D2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109056.2NP_001102526.2  nucleotidyltransferase MB21D2

      See identical proteins and their annotated locations for NP_001102526.2

      Status: VALIDATED

      Source sequence(s)
      CH473999
      UniProtKB/TrEMBL
      A6JRX1, D4ACS3
      Related
      ENSRNOP00000033286.4, ENSRNOT00000032569.7
      Conserved Domains (1) summary
      pfam03281
      Location:161401
      Mab-21; Mab-21 protein

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086029.1 Reference GRCr8

      Range
      85330526..85429543
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006248523.5XP_006248585.3  nucleotidyltransferase MB21D2 isoform X1

      Related
      ENSRNOP00000106960.1, ENSRNOT00000123556.1
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