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    Hebp2 heme binding protein 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 308632, updated on 9-Dec-2024

    Summary

    Official Symbol
    Hebp2provided by RGD
    Official Full Name
    heme binding protein 2provided by RGD
    Primary source
    RGD:1311553
    See related
    EnsemblRapid:ENSRNOG00000053735 AllianceGenome:RGD:1311553
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable heme binding activity. Predicted to be located in mitochondrion. Predicted to be active in cytoplasm. Orthologous to human HEBP2 (heme binding protein 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Lung (RPKM 18.9), Brain (RPKM 15.4) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Hebp2 in Genome Data Viewer
    Location:
    1p12
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (15014729..15021523, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (13194982..13201777, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (13713152..13719970, complement)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102549339 Neighboring gene NHS-like 1 Neighboring gene U6 spliceosomal RNA Neighboring gene large ribosomal subunit protein eL29-like Neighboring gene ARFGEF family member 3

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables heme binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001107515.3NP_001100985.1  heme-binding protein 2

      See identical proteins and their annotated locations for NP_001100985.1

      Status: PROVISIONAL

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A6JPA3, D3ZHC4
      Related
      ENSRNOP00000071984.1, ENSRNOT00000079522.3
      Conserved Domains (1) summary
      pfam04832
      Location:34193
      SOUL; SOUL heme-binding protein

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      15014729..15021523 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)