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    LOC102551899 uncharacterized LOC102551899 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 102551899, updated on 17-Aug-2024

    Summary

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    Symbol
    LOC102551899provided by RGD
    Full Name
    uncharacterized LOC102551899provided by RGD
    Primary source
    RGD:7684578
    See related
    AllianceGenome:RGD:7684578
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Thymus (RPKM 134.5), Spleen (RPKM 13.2) and 2 other tissues See more
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    Genomic context

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    See LOC102551899 in Genome Data Viewer
    Location:
    17p14
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 17 NC_086035.1 (21027983..21072907, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (20821998..20859865, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (24493824..24499492)

    Chromosome 17 - NC_086035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102550662 Neighboring gene uncharacterized LOC134482701 Neighboring gene uncharacterized LOC120097898 Neighboring gene CD83 molecule Neighboring gene uncharacterized LOC120097831

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. HAfTs are novel lncRNA transcripts from aflatoxin exposure. Merrick BA, et al. PLoS One, 2018. PMID 29351317, Free PMC Article

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086035.1 Reference GRCr8

      Range
      21027983..21072907 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_010059143.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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