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    Rasd2 RASD family, member 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 171099, updated on 9-Dec-2024

    Summary

    Official Symbol
    Rasd2provided by RGD
    Official Full Name
    RASD family, member 2provided by RGD
    Primary source
    RGD:628594
    See related
    EnsemblRapid:ENSRNOG00000014761 AllianceGenome:RGD:628594
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Rhes
    Summary
    Enables GTP binding activity; phosphatidylinositol 3-kinase binding activity; and ubiquitin conjugating enzyme binding activity. Involved in regulation of intracellular signal transduction and regulation of protein modification by small protein conjugation or removal. Located in plasma membrane. Orthologous to human RASD2 (RASD family member 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Brain (RPKM 134.4), Uterus (RPKM 75.9) and 5 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Rasd2 in Genome Data Viewer
    Location:
    19p11
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 19 NC_086037.1 (13600028..13610753)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 19 NC_051354.1 (13594291..13605016)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 19 NC_005118.4 (14653198..14663914)

    Chromosome 19 - NC_086037.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134483111 Neighboring gene heme oxygenase 1 Neighboring gene minichromosome maintenance complex component 5 Neighboring gene ubiquinol-cytochrome c reductase complex assembly factor 3, pseudogene 1 Neighboring gene trafficking protein particle complex subunit 2L like 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables G-protein beta-subunit binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables G-protein beta-subunit binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables GTP binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables phosphatidylinositol 3-kinase binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables ubiquitin conjugating enzyme binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    GTP-binding protein Rhes
    Names
    SE6C
    ras homolog enriched in striatum
    NP_598252.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_133568.2NP_598252.1  GTP-binding protein Rhes

      See identical proteins and their annotated locations for NP_598252.1

      Status: PROVISIONAL

      Source sequence(s)
      JAXUCZ010000019
      UniProtKB/Swiss-Prot
      P63033
      UniProtKB/TrEMBL
      A6JYA0
      Related
      ENSRNOP00000020017.2, ENSRNOT00000020017.5
      Conserved Domains (1) summary
      cd04143
      Location:20266
      Rhes_like; Ras homolog enriched in striatum (Rhes) and activator of G-protein signaling 1 (Dexras1/AGS1)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086037.1 Reference GRCr8

      Range
      13600028..13610753
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)