Mpzl1 myelin protein zero-like 1 [Rattus norvegicus (Norway rat)] - Gene

Summary

Symbol: Mpzl1provided by RGD
Full Name: myelin protein zero-like 1provided by RGD
Primary source: RGD:1359140
See related: EnsemblRapid:ENSRNOG00000003248 AllianceGenome:RGD:1359140
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Predicted to be located in membrane. Predicted to be active in plasma membrane. Orthologous to human MPZL1 (myelin protein zero like 1). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Biased expression in Lung (RPKM 222.6), Uterus (RPKM 130.5) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 13q23

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	13	NC_086031.1 (80385454..80422315, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	13	NC_051348.1 (77852467..77889305, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	13	NC_005112.4 (83805244..83842074, complement)

Chromosome 13 - NC_086031.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: myelin protein zero-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001007728.2 → NP_001007729.1 myelin protein zero-like protein 1 isoform 1 precursor

See identical proteins and their annotated locations for NP_001007729.1

Status: VALIDATED

Source sequence(s)

JAXUCZ010000013

UniProtKB/Swiss-Prot

Q6AYT8

UniProtKB/TrEMBL

A0A8I6A952, A6IDH5

Related

ENSRNOP00000004376.4, ENSRNOT00000004376.7

Conserved Domains (2) summary

cd00096
Location:38 → 42

Ig; Ig strand A [structural motif]

cl11960
Location:38 → 154

Ig; Immunoglobulin domain
NM_001429783.1 → NP_001416712.1 myelin protein zero-like protein 1 isoform 2 precursor

Status: VALIDATED

Source sequence(s)

JAXUCZ010000013

UniProtKB/TrEMBL

A0A8I6A9E7, A6IDH6, A6IDH7

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

NC_086031.1 Reference GRCr8

Range

80385454..80422315 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_006250180.5 → XP_006250242.1 myelin protein zero-like protein 1 isoform X1

Related

ENSRNOP00000089948.2, ENSRNOT00000093821.2

Conserved Domains (2) summary

cd05715
Location:39 → 154

Ig_P0-like; Immunoglobulin (Ig)-like domain of Protein zero (P0) and similar proteins

smart00410
Location:43 → 154

IG_like; Immunoglobulin like