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    2610318N02Rikl RIKEN cDNA 2610318N02 gene like [ Rattus norvegicus (Norway rat) ]

    Gene ID: 287935, updated on 3-Dec-2024

    Summary

    Official Symbol
    2610318N02Riklprovided by RGD
    Official Full Name
    RIKEN cDNA 2610318N02 gene likeprovided by RGD
    Primary source
    RGD:1308065
    See related
    EnsemblRapid:ENSRNOG00000026918 AllianceGenome:RGD:1308065
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1308065
    Expression
    Restricted expression toward (RPKM 307.3) See more
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    Genomic context

    See 2610318N02Rikl in Genome Data Viewer
    Location:
    11q23
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (97383363..97400092)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (83879178..83895877)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (88128785..88145488)

    Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene YdjC chitooligosaccharide deacetylase homolog Neighboring gene coiled-coil domain containing 116 Neighboring gene stromal cell-derived factor 2-like 1 Neighboring gene microRNA 301b Neighboring gene microRNA 130b Neighboring gene peptidylprolyl isomerase like 2 Neighboring gene yippee-like 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    uncharacterized protein LOC287935

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001077666.1 → NP_001071134.1  uncharacterized protein LOC287935

      See identical proteins and their annotated locations for NP_001071134.1

      Status: PREDICTED

      Source sequence(s)
      BC127537
      UniProtKB/TrEMBL
      A0JPQ2, A6JSN1
      Related
      ENSRNOP00000040753.3, ENSRNOT00000046664.5

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086029.1 Reference GRCr8

      Range
      97383363..97400092
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063270320.1 → XP_063126390.1  uncharacterized protein LOC287935 isoform X1

      UniProtKB/TrEMBL
      A6JSN1, A6JSN2, G3V9A1
    2. XM_008768856.4 → XP_008767078.1  uncharacterized protein LOC287935 isoform X1

      See identical proteins and their annotated locations for XP_008767078.1

      UniProtKB/TrEMBL
      A6JSN1, A6JSN2, G3V9A1
      Related
      ENSRNOP00000102367.1, ENSRNOT00000134461.1
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