Spmip7 sperm microtubule inner protein 7 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Spmip7provided by RGD
Official Full Name: sperm microtubule inner protein 7provided by RGD
Primary source: RGD:1309870
See related: EnsemblRapid:ENSRNOG00000037621 AllianceGenome:RGD:1309870
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Spata48; RGD1309870
Summary: Predicted to be involved in spermatogenesis. Orthologous to human SPMIP7 (sperm microtubule inner protein 7). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Restricted expression toward (RPKM 52.1) See more
Orthologs: human mouse all
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Genomic context

Location:: 14q21

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	14	NC_086032.1 (90244087..90299294)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	14	NC_051349.1 (86030427..86085644)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	14	NC_005113.4 (91556782..91614099)

Chromosome 14 - NC_086032.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in spermatogenesis	IBA Inferred from Biological aspect of Ancestor more info
involved_in spermatogenesis	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: protein SPMIP7

Names: spermatogenesis associated 48; spermatogenesis-associated protein 48; uncharacterized protein C7orf72 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.