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    Bcap29 B-cell receptor-associated protein 29 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 298943, updated on 9-Dec-2024

    Summary

    Official Symbol
    Bcap29provided by RGD
    Official Full Name
    B-cell receptor-associated protein 29provided by RGD
    Primary source
    RGD:1359431
    See related
    EnsemblRapid:ENSRNOG00000007884 AllianceGenome:RGD:1359431
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport and protein localization to endoplasmic reticulum exit site. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human BCAP29 (B cell receptor associated protein 29). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 286.6), Heart (RPKM 143.5) and 9 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Bcap29 in Genome Data Viewer
    Location:
    6q16
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (53910209..53950206, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (48182702..48222698, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (50883758..50923743, complement)

    Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102555378 Neighboring gene solute carrier family 26 member 4 Neighboring gene uncharacterized LOC108351220 Neighboring gene uncharacterized LOC134479362 Neighboring gene dihydrouridine synthase 4-like Neighboring gene component of oligomeric golgi complex 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Clone Names

    • MGC93926

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum membrane  

    General protein information

    Preferred Names
    B-cell receptor-associated protein 29
    Names
    B-cell receptor-associated protein BAP29

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001006980.1NP_001006981.1  B-cell receptor-associated protein 29

      See identical proteins and their annotated locations for NP_001006981.1

      Status: PROVISIONAL

      Source sequence(s)
      BC083576
      UniProtKB/TrEMBL
      A0A8I6GLJ4, Q5XIU4
      Related
      ENSRNOP00000010631.6, ENSRNOT00000010631.6
      Conserved Domains (1) summary
      pfam05529
      Location:1220
      Bap31; B-cell receptor-associated protein 31-like

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086024.1 Reference GRCr8

      Range
      53910209..53950206 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006239982.4XP_006240044.1  B-cell receptor-associated protein 29 isoform X1

      See identical proteins and their annotated locations for XP_006240044.1

      UniProtKB/TrEMBL
      A0A8I6GLJ4, Q5XIU4
      Conserved Domains (1) summary
      pfam05529
      Location:1220
      Bap31; B-cell receptor-associated protein 31-like
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