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    Atraid all-trans retinoic acid-induced differentiation factor [ Rattus norvegicus (Norway rat) ]

    Gene ID: 298841, updated on 9-Dec-2024

    Summary

    Official Symbol
    Atraidprovided by RGD
    Official Full Name
    all-trans retinoic acid-induced differentiation factorprovided by RGD
    Primary source
    RGD:1311605
    See related
    EnsemblRapid:ENSRNOG00000087533 AllianceGenome:RGD:1311605
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1311605
    Summary
    Predicted to enable xenobiotic transmembrane transporter activity. Predicted to be involved in several processes, including negative regulation of osteoblast proliferation; positive regulation of osteoblast differentiation; and xenobiotic transmembrane transport. Predicted to be located in lysosomal membrane; nuclear envelope; and perinuclear region of cytoplasm. Predicted to be active in intracellular membrane-bounded organelle. Orthologous to human ATRAID (all-trans retinoic acid induced differentiation factor). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 208.8), Liver (RPKM 189.4) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Atraid in Genome Data Viewer
    Location:
    6q14
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (31035194..31039779, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (25315236..25319821, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (26680628..26685185, complement)

    Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 30 member 3 Neighboring gene carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase Neighboring gene solute carrier family 5 member 6 Neighboring gene transcription factor 23

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    all-trans retinoic acid-induced differentiation factor
    Names
    p18 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001127526.2NP_001120998.1  all-trans retinoic acid-induced differentiation factor precursor

      See identical proteins and their annotated locations for NP_001120998.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000006
      UniProtKB/TrEMBL
      A6HA86, B2RYU3
      Related
      ENSRNOP00000111407.1, ENSRNOT00000125867.1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086024.1 Reference GRCr8

      Range
      31035194..31039779 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)