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    Wdr95 WD40 repeat domain 95 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100361588, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Wdr95provided by RGD
    Official Full Name
    WD40 repeat domain 95provided by RGD
    Primary source
    RGD:1561029
    See related
    EnsemblRapid:ENSRNOG00000000904 AllianceGenome:RGD:1561029
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1561029
    Expression
    Biased expression in Testes (RPKM 11.2) and Lung (RPKM 6.6) See more
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    Genomic context

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    See Wdr95 in Genome Data Viewer
    Location:
    12p11
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (10452187..10502622, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (5415815..5466253, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (6265417..6317097)

    Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108352411 Neighboring gene heat shock protein family H (Hsp110) member 1 Neighboring gene uncharacterized LOC120095877 Neighboring gene uncharacterized LOC102551137

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    WD repeat-containing protein on Y chromosome-like
    Names
    F-box and WD repeat domain containing 7-like
    WD repeat-containing protein 49-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086030.1 Reference GRCr8

      Range
      10452187..10502622 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039089920.2 → XP_038945848.1  WD repeat-containing protein on Y chromosome-like

      UniProtKB/TrEMBL
      F1M3H0
      Related
      ENSRNOP00000105001.1, ENSRNOT00000142595.1
      Conserved Domains (3) summary
      cd00200
      Location:19 → 324
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:31 → 67
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:198 → 480
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein Strain
    Heading Accession and Version

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