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    LOC102552128 late cornified envelope protein 1C-like [ Rattus norvegicus (Norway rat) ]

    Gene ID: 102552128, updated on 9-Dec-2024

    Summary

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    Symbol
    LOC102552128provided by RGD
    Full Name
    late cornified envelope protein 1C-likeprovided by RGD
    Primary source
    RGD:7532496
    See related
    AllianceGenome:RGD:7532496
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be involved in keratinization. Orthologous to several human genes including LCE1A (late cornified envelope 1A); LCE1B (late cornified envelope 1B); and LCE1C (late cornified envelope 1C). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward (RPKM 29.8) See more
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    Genomic context

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    See LOC102552128 in Genome Data Viewer
    Location:
    2q34
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (181018378..181018767, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (178322769..178323158, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (193007315..193008931, complement)

    Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member B6, pseudogene 8 Neighboring gene late cornified envelope 1F Neighboring gene late cornified envelope 1F like 1 Neighboring gene late cornified envelope protein 1E-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RGD

    Process Evidence Code Pubs
    involved_in keratinization IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    late cornified envelope protein 1C-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086020.1 Reference GRCr8

      Range
      181018378..181018767 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006232825.4 → XP_006232887.1  late cornified envelope protein 1C-like

      See identical proteins and their annotated locations for XP_006232887.1

      UniProtKB/TrEMBL
      A0A8I6A3H2, A0A8I6ABX7
    Nucleotide Protein Strain
    Heading Accession and Version

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