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    Lpar4 lysophosphatidic acid receptor 4 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 302378, updated on 9-Dec-2024

    Summary

    Official Symbol
    Lpar4provided by RGD
    Official Full Name
    lysophosphatidic acid receptor 4provided by RGD
    Primary source
    RGD:1563686
    See related
    EnsemblRapid:ENSRNOG00000002428 AllianceGenome:RGD:1563686
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Gpr23; RGD1563686
    Summary
    Predicted to enable lysophosphatidic acid binding activity and lysophosphatidic acid receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in nuclear body. Predicted to be active in plasma membrane. Orthologous to human LPAR4 (lysophosphatidic acid receptor 4). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Muscle (RPKM 24.0), Heart (RPKM 21.5) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Lpar4 in Genome Data Viewer
    Location:
    Xq22
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (76106319..76119807)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (72033486..72046978)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (78042859..78056347)

    Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene selenoprotein K, pseudogene 6 Neighboring gene U6 spliceosomal RNA Neighboring gene P2Y receptor family member 10 Neighboring gene U6 spliceosomal RNA Neighboring gene P2Y receptor family member 10B

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in intracellular membrane-bounded organelle  
    located_in nuclear body  
    located_in nuclear body  
    is_active_in plasma membrane  
    located_in plasma membrane  

    General protein information

    Preferred Names
    lysophosphatidic acid receptor 4
    Names
    G protein-coupled receptor 23

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001106940.1 → NP_001100410.1  lysophosphatidic acid receptor 4

      See identical proteins and their annotated locations for NP_001100410.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473969
      UniProtKB/TrEMBL
      A6IV57, D3ZHA3
      Related
      ENSRNOP00000110975.1, ENSRNOT00000156212.1
      Conserved Domains (1) summary
      cd15155
      Location:40 → 322
      7tmA_LPAR4; lysophosphatidic acid receptor 4, member of the class A family of seven-transmembrane G protein-coupled receptors

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086039.1 Reference GRCr8

      Range
      76106319..76119807
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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