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    Dbh dopamine beta-hydroxylase [ Rattus norvegicus (Norway rat) ]

    Gene ID: 25699, updated on 9-Dec-2024

    Summary

    Official Symbol
    Dbhprovided by RGD
    Official Full Name
    dopamine beta-hydroxylaseprovided by RGD
    Primary source
    RGD:2489
    See related
    EnsemblRapid:ENSRNOG00000006641 AllianceGenome:RGD:2489
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    DOPBHY
    Summary
    Enables copper ion binding activity and dopamine beta-monooxygenase activity. Involved in several processes, including cellular response to manganese ion; cellular response to nicotine; and norepinephrine biosynthetic process. Located in several cellular components, including axon; dendrite; and neuronal cell body. Biomarker of brain ischemia; depressive disorder; hypertension; and portal hypertension. Human ortholog(s) of this gene implicated in several diseases, including alcohol use disorder; attention deficit hyperactivity disorder; dopamine beta-hydroxylase deficiency; hypertension; and migraine with aura. Orthologous to human DBH (dopamine beta-hydroxylase). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward (RPKM 642.7) See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Dbh in Genome Data Viewer
    Location:
    3p12
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (30886313..30903313)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (10488260..10505245)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (5709236..5731895)

    Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 163, member B Neighboring gene uncharacterized LOC134486349 Neighboring gene uncharacterized LOC102548789 Neighboring gene sarcosine dehydrogenase Neighboring gene vav guanine nucleotide exchange factor 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables L-ascorbic acid binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables copper ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables copper ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables copper ion binding IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables copper ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables copper ion binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables dopamine beta-monooxygenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables dopamine beta-monooxygenase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables dopamine beta-monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables dopamine beta-monooxygenase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables dopamine beta-monooxygenase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables dopamine beta-monooxygenase activity TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within associative learning ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in behavioral response to ethanol IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within behavioral response to ethanol ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in blood vessel remodeling IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within blood vessel remodeling ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in bone development IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in catecholamine metabolic process IC
    Inferred by Curator
    more info
    PubMed 
    involved_in cellular response to manganese ion IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in cellular response to nicotine IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in dopamine catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in dopamine catabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within dopamine catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in dopamine catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in dopamine catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in fear response IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within fear response ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in glucose homeostasis IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within glucose homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in homoiothermy IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within homoiothermy ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in leukocyte mediated immunity IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within leukocyte mediated immunity ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in leukocyte migration IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within leukocyte migration ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in locomotory behavior IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within locomotory behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in locomotory behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in maternal behavior IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within maternal behavior ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in memory IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within memory ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in norepinephrine biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in norepinephrine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in norepinephrine biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within norepinephrine biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in norepinephrine biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in norepinephrine biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in norepinephrine biosynthetic process TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in octopamine biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in octopamine metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of cold-induced thermogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cold-induced thermogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in positive regulation of vasoconstriction IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within positive regulation of vasoconstriction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of extrinsic apoptotic signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within regulation of extrinsic apoptotic signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of vascular associated smooth muscle cell proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within regulation of vascular associated smooth muscle cell proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of vascular endothelial cell proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within regulation of vascular endothelial cell proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to amphetamine IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within response to amphetamine ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to copper ion IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to estradiol IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to ethanol IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to immobilization stress IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to iron ion IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to isolation stress IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to organic cyclic compound IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to ozone IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to pain IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within response to pain ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to peptide hormone IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to xenobiotic stimulus IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in social behavior IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in vasoconstriction IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of vasoconstriction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in visual learning IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within visual learning ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in apical part of cell IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in axon IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in centriolar satellite IEA
    Inferred from Electronic Annotation
    more info
     
    located_in centriolar satellite ISO
    Inferred from Sequence Orthology
    more info
     
    located_in chromaffin granule lumen IEA
    Inferred from Electronic Annotation
    more info
     
    located_in chromaffin granule membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in dendrite IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     
    located_in extracellular space ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in neuronal cell body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in secretory granule lumen ISO
    Inferred from Sequence Orthology
    more info
     
    located_in secretory granule lumen ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in secretory granule membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in secretory granule membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in secretory granule membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in terminal bouton IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in transport vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in varicosity IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    dopamine beta-hydroxylase
    Names
    Dopamine beta hydroxylase (dopamine beta-monooxygenase)
    dopamine beta-monooxygenase
    NP_037290.3
    XP_063139234.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_013158.3NP_037290.3  dopamine beta-hydroxylase precursor

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000003
      UniProtKB/Swiss-Prot
      Q05754
      UniProtKB/TrEMBL
      A6JTK7, G3V9S4
      Related
      ENSRNOP00000057915.1, ENSRNOT00000061201.5
      Conserved Domains (3) summary
      pfam01082
      Location:217340
      Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
      pfam03351
      Location:60175
      DOMON; DOMON domain
      pfam03712
      Location:363519
      Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086021.1 Reference GRCr8

      Range
      30886313..30903313
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063283164.1XP_063139234.1  dopamine beta-hydroxylase isoform X1