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    Avpr1b arginine vasopressin receptor 1B [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100909648, updated on 9-Dec-2024

    Summary

    Official Symbol
    Avpr1bprovided by RGD
    Official Full Name
    arginine vasopressin receptor 1Bprovided by RGD
    Primary source
    RGD:6502812
    See related
    EnsemblRapid:ENSRNOG00000048522 AllianceGenome:RGD:6502812
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    V1bR; AVPR V3; AVPR V1b
    Summary
    Enables identical protein binding activity; peptide hormone binding activity; and vasopressin receptor activity. Involved in several processes, including adenylate cyclase-modulating G protein-coupled receptor signaling pathway; positive regulation of cellular pH reduction; and positive regulation of glutamate secretion. Located in dendrite. Used to study anxiety disorder and depressive disorder. Biomarker of alcohol dependence. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Brain (RPKM 1.5), Heart (RPKM 0.2) and 2 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Avpr1b in Genome Data Viewer
    Location:
    13q13
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 13 NC_086031.1 (45598116..45611680)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 13 NC_051348.1 (43046531..43059046)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 13 NC_005112.4 (48390434..48400583, complement)

    Chromosome 13 - NC_086031.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134481491 Neighboring gene uncharacterized LOC134481492 Neighboring gene ribosomal protein L36A, pseudogene 14 Neighboring gene cathepsin E Neighboring gene Rab7b, member RAS oncogene family

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables peptide hormone binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables peptide hormone binding IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables vasopressin receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables vasopressin receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables vasopressin receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables vasopressin receptor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables vasopressin receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in G protein-coupled receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in G protein-coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in adenylate cyclase-modulating G protein-coupled receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in cellular response to hormone stimulus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in phospholipase C-activating G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in phospholipase C-activating G protein-coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of MAPK cascade IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of MAPK cascade ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of arachidonate secretion IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of arachidonate secretion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cellular pH reduction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of cytosolic calcium ion concentration IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of glutamate secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of inositol phosphate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of inositol phosphate biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of phospholipase A2 activity ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of vasoconstriction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of blood pressure ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of cell population proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of systemic arterial blood pressure by vasopressin IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of systemic arterial blood pressure by vasopressin IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within regulation of systemic arterial blood pressure by vasopressin ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in symbiont entry into host cell IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in dendrite IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    vasopressin V1b receptor
    Names
    antidiuretic hormone receptor 1b
    vasopressin V3 receptor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001289800.2NP_001276729.1  vasopressin V1b receptor

      See identical proteins and their annotated locations for NP_001276729.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000013
      UniProtKB/Swiss-Prot
      P48974
      UniProtKB/TrEMBL
      A6IC22, G3V6U8
      Related
      ENSRNOP00000064689.1, ENSRNOT00000074512.4
      Conserved Domains (3) summary
      pfam00001
      Location:51335
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      pfam08983
      Location:359408
      DUF1856; Domain of unknown function (DUF1856)
      cl21561
      Location:41184
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086031.1 Reference GRCr8

      Range
      45598116..45611680
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063271945.1XP_063128015.1  vasopressin V1b receptor isoform X1

      UniProtKB/Swiss-Prot
      P48974
      UniProtKB/TrEMBL
      A6IC22, G3V6U8