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    Tmem212 transmembrane protein 212 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 499586, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Tmem212provided by RGD
    Official Full Name
    transmembrane protein 212provided by RGD
    Primary source
    RGD:1563109
    See related
    EnsemblRapid:ENSRNOG00000012608 AllianceGenome:RGD:1563109
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1563109
    Summary
    Predicted to be located in membrane. Orthologous to human TMEM212 (transmembrane protein 212). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Lung (RPKM 27.7), Brain (RPKM 5.4) and 2 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Tmem212 in Genome Data Viewer
    Location:
    2q24
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (112704547..112741924, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (110775950..110813313, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (113578614..113616786, complement)

    Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinase 1, pseudogene 1 Neighboring gene 60S ribosomal protein L17 pseudogene Neighboring gene uncharacterized LOC102555566 Neighboring gene phospholipase D1 Neighboring gene uncharacterized LOC120100789 Neighboring gene ribosomal protein L15, pseudogene 12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane protein 212

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001164438.1 → NP_001157910.1  transmembrane protein 212 isoform 1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
      Source sequence(s)
      JAXUCZ010000002
      UniProtKB/TrEMBL
      A0A8I6A9Z3, M0RBS4
      Related
      ENSRNOP00000067020.1, ENSRNOT00000074723.3

    2. NM_001164439.1 → NP_001157911.1  transmembrane protein 212 isoform 2

      See identical proteins and their annotated locations for NP_001157911.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate exon in the 3' coding region, compared to variant 1. The resulting isoform (2) has a shorter and distinct C-terminus, compared to isoform 1.
      Source sequence(s)
      BE108013, CO384351
      UniProtKB/TrEMBL
      A0A8I6A9Z3, A6IHH6, D3ZW63
      Related
      ENSRNOP00000016858.6, ENSRNOT00000016858.10

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086020.1 Reference GRCr8

      Range
      112704547..112741924 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063282354.1 → XP_063138424.1  transmembrane protein 212 isoform X4

    2. XM_039102864.2 → XP_038958792.1  transmembrane protein 212 isoform X3

    3. XM_006232219.4 → XP_006232281.1  transmembrane protein 212 isoform X2

      UniProtKB/TrEMBL
      A0A8I6A9Z3, A0A8I6AQP5
      Related
      ENSRNOP00000109695.1, ENSRNOT00000159350.1

    4. XM_039102862.2 → XP_038958790.1  transmembrane protein 212 isoform X1

      UniProtKB/TrEMBL
      A0A8I6A9Z3
      Related
      ENSRNOP00000096381.2, ENSRNOT00000111448.2

    5. XM_063282355.1 → XP_063138425.1  transmembrane protein 212 isoform X5

    Nucleotide Protein Strain
    Heading Accession and Version

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