U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Mab21l4 mab-21 like 4 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 501185, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Mab21l4provided by RGD
    Official Full Name
    mab-21 like 4provided by RGD
    Primary source
    RGD:1563692
    See related
    EnsemblRapid:ENSRNOG00000023557 AllianceGenome:RGD:1563692
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1563692
    Summary
    Orthologous to human MAB21L4 (mab-21 like 4). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward (RPKM 73.9) See more
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Mab21l4 in Genome Data Viewer
    Location:
    9q36
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (101138408..101148516, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (93690455..93701267, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (100296780..100307415, complement)

    Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 1A Neighboring gene uncharacterized LOC120094749 Neighboring gene alanine--glyoxylate aminotransferase Neighboring gene ciliary rootlet coiled-coil, rootletin family member 2 Neighboring gene uncharacterized LOC134480612 Neighboring gene sushi, nidogen and EGF-like domains 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein mab-21-like 4
    Names
    uncharacterized protein C2orf54 homolog

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109311.2 → NP_001102781.1  protein mab-21-like 4

      See identical proteins and their annotated locations for NP_001102781.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000009
      UniProtKB/TrEMBL
      B1WC80, F7FIX6
      Related
      ENSRNOP00000030463.3, ENSRNOT00000038563.5
      Conserved Domains (1) summary
      pfam03281
      Location:144 → 369
      Mab-21; Mab-21 protein

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086027.1 Reference GRCr8

      Range
      101138408..101148516 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006245547.5 → XP_006245609.1  protein mab-21-like 4 isoform X1

      See identical proteins and their annotated locations for XP_006245609.1

      UniProtKB/TrEMBL
      B1WC80, F7FIX6
      Conserved Domains (1) summary
      pfam03281
      Location:144 → 369
      Mab-21; Mab-21 protein

    2. XM_039084126.2 → XP_038940054.1  protein mab-21-like 4 isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools