Tmem239 transmembrane 239 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Tmem239provided by RGD
Official Full Name: transmembrane 239provided by RGD
Primary source: RGD:1592450
See related: EnsemblRapid:ENSRNOG00000047004 AllianceGenome:RGD:1592450
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Orthologous to several human genes including C20orf141 (chromosome 20 open reading frame 141). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Biased expression in Testes (RPKM 36.5), Brain (RPKM 8.9) and 4 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 3q36

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	3	NC_086021.1 (138057799..138059090)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	3	NC_051338.1 (117604765..117605978)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	3	NC_005102.4 (122927246..122929672)

Chromosome 3 - NC_086021.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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General protein information

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Preferred Names: transmembrane protein 239

Names: rCG26795-like; uncharacterized protein C20orf141 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.