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    Igsf23 immunoglobulin superfamily, member 23 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 502306, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Igsf23provided by RGD
    Official Full Name
    immunoglobulin superfamily, member 23provided by RGD
    Primary source
    RGD:1564357
    See related
    EnsemblRapid:ENSRNOG00000024630 AllianceGenome:RGD:1564357
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1564357
    Summary
    Predicted to be involved in osteoclast differentiation. Predicted to be located in plasma membrane. Orthologous to human IGSF23 (immunoglobulin superfamily member 23). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Lung (RPKM 2.3), Uterus (RPKM 1.7) and 7 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Igsf23 in Genome Data Viewer
    Location:
    1q21
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (88719000..88738391, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (79591059..79606323, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (80850783..80869481, complement)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene PVR cell adhesion molecule Neighboring gene uncharacterized LOC134484889 Neighboring gene CEA cell adhesion molecule 20 Neighboring gene SUB1 regulator of transcription, pseudogene 1 Neighboring gene zinc finger protein 180 Neighboring gene thymosin beta-4-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RGD

    Process Evidence Code Pubs
    involved_in osteoclast differentiation ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

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    Preferred Names
    immunoglobulin superfamily member 23
    Names
    mCG54481-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001432475.1 → NP_001419404.1  immunoglobulin superfamily member 23 precursor

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      M0R9H9

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      88719000..88738391 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017590007.3 → XP_017445496.1  immunoglobulin superfamily member 23

      UniProtKB/TrEMBL
      M0R9H9
      Related
      ENSRNOP00000111938.1, ENSRNOT00000136906.1
      Conserved Domains (1) summary
      cl11960
      Location:143 → 197
      Ig; Immunoglobulin domain
    Nucleotide Protein Strain
    Heading Accession and Version

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