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    Ccer2 coiled-coil glutamate-rich protein 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100909701, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Ccer2provided by RGD
    Official Full Name
    coiled-coil glutamate-rich protein 2provided by RGD
    Primary source
    RGD:6502457
    See related
    AllianceGenome:RGD:6502457
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Orthologous to human CCER2 (coiled-coil glutamate rich protein 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Thymus (RPKM 54.6), Spleen (RPKM 8.1) and 3 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Ccer2 in Genome Data Viewer
    Location:
    1q21
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (93171292..93173747)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (84041697..84046225)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (86936391..86939994)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene MARCKS-related protein-like Neighboring gene F-box protein 17 Neighboring gene mitochondrial ribosomal protein S12 Neighboring gene seryl-tRNA synthetase 2, mitochondrial Neighboring gene NFKB inhibitor beta Neighboring gene sirtuin 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    coiled-coil domain-containing glutamate-rich protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      93171292..93173747
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008759219.3 → XP_008757441.2  coiled-coil domain-containing glutamate-rich protein 2

      UniProtKB/TrEMBL
      A0A8I5ZK60
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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