U.S. flag

An official website of the United States government

Links from GEO Profiles

    • Showing Current items.

    Coq10a coenzyme Q10A [ Rattus norvegicus (Norway rat) ]

    Gene ID: 362810, updated on 9-Dec-2024

    Summary

    Official Symbol
    Coq10aprovided by RGD
    Official Full Name
    coenzyme Q10Aprovided by RGD
    Primary source
    RGD:1562447
    See related
    EnsemblRapid:ENSRNOG00000029571 AllianceGenome:RGD:1562447
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1562447
    Summary
    Predicted to enable ubiquinone binding activity. Predicted to be involved in cellular respiration. Predicted to be active in mitochondrion. Orthologous to human COQ10A (coenzyme Q10A). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Muscle (RPKM 417.9), Heart (RPKM 194.2) and 8 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Coq10a in Genome Data Viewer
    Location:
    7q11
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (1376591..1387694, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (792089..798392, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (2780930..2788189, complement)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene canopy FGF signaling regulator 2 Neighboring gene citrate synthase Neighboring gene ankyrin repeat domain 52 Neighboring gene solute carrier family 39 member 5 Neighboring gene small nucleolar RNA SNORA79 Neighboring gene nucleic acid binding protein 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables ubiquinone binding  
    Component Evidence Code Pubs
    is_active_in mitochondrion  
    located_in mitochondrion PubMed 

    General protein information

    Preferred Names
    coenzyme Q-binding protein COQ10 homolog A, mitochondrial
    Names
    coenzyme Q10 homolog A

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001108727.1 → NP_001102197.1  coenzyme Q-binding protein COQ10 homolog A, mitochondrial

      See identical proteins and their annotated locations for NP_001102197.1

      Status: PROVISIONAL

      Source sequence(s)
      CH474104
      UniProtKB/TrEMBL
      A6KSC6, D3ZX74
      Related
      ENSRNOP00000044290.3, ENSRNOT00000047530.6
      Conserved Domains (1) summary
      cd07813
      Location:57 → 195
      COQ10p_like; Coenzyme Q-binding protein COQ10p and similar proteins

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      1376591..1387694 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006240759.5 → XP_006240821.1  coenzyme Q-binding protein COQ10 homolog A, mitochondrial isoform X1

      See identical proteins and their annotated locations for XP_006240821.1

      UniProtKB/TrEMBL
      A6KSC5
      Conserved Domains (1) summary
      cd07813
      Location:89 → 227
      COQ10p_like; Coenzyme Q-binding protein COQ10p and similar proteins
    2. XM_039079365.2 → XP_038935293.1  coenzyme Q-binding protein COQ10 homolog A, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A0G2JYY6
      Related
      ENSRNOP00000070841.2, ENSRNOT00000086939.3
      Conserved Domains (1) summary
      cd07813
      Location:89 → 237
      COQ10p_like; Coenzyme Q-binding protein COQ10p and similar proteins
    External link. Please review our privacy policy.