Cox6c-ps1 cytochrome c oxidase subunit VIc, pseudogene [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Cox6c-ps1provided by RGD
Official Full Name: cytochrome c oxidase subunit VIc, pseudogeneprovided by RGD
Primary source: RGD:735056
See related: EnsemblRapid:ENSRNOG00000032602 AllianceGenome:RGD:735056
Gene type: pseudo
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Cox6c1; COX-VIc-1
Summary: Predicted to be involved in oxidative phosphorylation. Predicted to be located in mitochondrial inner membrane. Orthologous to human COX6C (cytochrome c oxidase subunit 6C). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

Location:: 19q12

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	19	NC_086037.1 (69090047..69090905, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	19	NC_051354.1 (52192612..52193470, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	19	NC_005118.4 (56982949..56983807, complement)

Chromosome 19 - NC_086037.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Other Names

cytochrome c oxidase polypeptide VIc-1
cytochrome c oxidase subunit 6C-1
cytochrome c oxidase subunit VIc-1

Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in oxidative phosphorylation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in mitochondrial inner membrane	IEA Inferred from Electronic Annotation more info

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

NR_037621.1 RNA Sequence

Status: VALIDATED

Source sequence(s)

JAXUCZ010000019

Related

ENSRNOT00000043529.4

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

NC_086037.1 Reference GRCr8

Range

69090047..69090905 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

NM_173303.1: Suppressed sequence

Description

NM_173303.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.