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    Spryd3 SPRY domain containing 3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 315327, updated on 9-Dec-2024

    Summary

    Official Symbol
    Spryd3provided by RGD
    Official Full Name
    SPRY domain containing 3provided by RGD
    Primary source
    RGD:1561500
    See related
    EnsemblRapid:ENSRNOG00000010793 AllianceGenome:RGD:1561500
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1561500
    Summary
    Orthologous to human SPRYD3 (SPRY domain containing 3). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Brain (RPKM 281.0), Lung (RPKM 87.1) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Spryd3 in Genome Data Viewer
    Location:
    7q36
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (135126598..135143775, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (133247982..133265161, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (143721088..143738237, complement)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4B Neighboring gene uncharacterized LOC134479789 Neighboring gene tensin 2 Neighboring gene insulin-like growth factor binding protein 6 Neighboring gene sterol O-acyltransferase 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    SPRY domain-containing protein 3
    NP_001178719.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001191790.1NP_001178719.1  SPRY domain-containing protein 3

      See identical proteins and their annotated locations for NP_001178719.1

      Status: PROVISIONAL

      Source sequence(s)
      JAXUCZ010000007
      UniProtKB/TrEMBL
      F1M7P8
      Related
      ENSRNOP00000052188.3, ENSRNOT00000055320.4
      Conserved Domains (1) summary
      cd12908
      Location:220438
      SPRYD3; SPRY domain-containing protein 3

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      135126598..135143775 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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