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    Oxa1l OXA1L, mitochondrial inner membrane protein [ Rattus norvegicus (Norway rat) ]

    Gene ID: 691393, updated on 9-Dec-2024

    Summary

    Official Symbol
    Oxa1lprovided by RGD
    Official Full Name
    OXA1L, mitochondrial inner membrane proteinprovided by RGD
    Primary source
    RGD:1585024
    See related
    EnsemblRapid:ENSRNOG00000009713 AllianceGenome:RGD:1585024
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable membrane insertase activity; mitochondrial ribosome binding activity; and protein homodimerization activity. Predicted to be involved in several processes, including mitochondrial protein quality control; mitochondrion organization; and protein tetramerization. Predicted to be located in mitochondrial membrane. Predicted to be part of protein-containing complex. Predicted to be active in mitochondrial inner membrane. Orthologous to human OXA1L (OXA1L mitochondrial inner membrane protein). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Heart (RPKM 385.8), Kidney (RPKM 310.8) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Oxa1l in Genome Data Viewer
    Location:
    15p13
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 15 NC_086033.1 (31783725..31791353)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 15 NC_051350.1 (27813688..27821319)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 15 NC_005114.4 (33004957..33012584)

    Chromosome 15 - NC_086033.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102550121 Neighboring gene uncharacterized LOC108352920 Neighboring gene solute carrier family 7 member 7 Neighboring gene mitochondrial ribosomal protein L52

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables membrane insertase activity  
    enables membrane insertase activity  
    enables mitochondrial ribosome binding  
    enables protein homodimerization activity  
    Component Evidence Code Pubs
    is_active_in mitochondrial inner membrane  
    is_active_in mitochondrial inner membrane  
    located_in mitochondrial membrane  
    located_in mitochondrion  
    part_of protein-containing complex  

    General protein information

    Preferred Names
    mitochondrial inner membrane protein OXA1L
    Names
    oxidase (cytochrome c) assembly 1-like
    oxidase assembly 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001168583.1NP_001162055.1  mitochondrial inner membrane protein OXA1L

      See identical proteins and their annotated locations for NP_001162055.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000015
      UniProtKB/TrEMBL
      A6KGS2, A6KGS3, D3ZRH1
      Related
      ENSRNOP00000013246.5, ENSRNOT00000013246.9
      Conserved Domains (1) summary
      cd20069
      Location:132331
      5TM_Oxa1-like; Five transmembrane core domain of mitochondrial inner membrane protein Oxa1 and similar proteins

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086033.1 Reference GRCr8

      Range
      31783725..31791353
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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