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    Epcip exosomal polycystin 1 interacting protein [ Rattus norvegicus (Norway rat) ]

    Gene ID: 498060, updated on 9-Dec-2024

    Summary

    Official Symbol
    Epcipprovided by RGD
    Official Full Name
    exosomal polycystin 1 interacting proteinprovided by RGD
    Primary source
    RGD:1562726
    See related
    EnsemblRapid:ENSRNOG00000028670 AllianceGenome:RGD:1562726
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1562726; C11h21orf62
    Summary
    Predicted to be involved in mitocytosis. Predicted to be located in extracellular exosome. Predicted to be active in migrasome. Orthologous to human EPCIP (exosomal polycystin 1 interacting protein). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 21.4), Kidney (RPKM 11.9) and 7 other tissues See more
    Orthologs
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    Try the new Transcript table

    Genomic context

    See Epcip in Genome Data Viewer
    Location:
    11q11
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (43793924..43811388, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (30307842..30325829, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (31220566..31238495, complement)

    Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene synaptojanin 1 Neighboring gene PAX3 and PAX7 binding protein 1 Neighboring gene uncharacterized LOC102554018 Neighboring gene uncharacterized LOC108352305

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in mitocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mitocytosis ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in extracellular exosome ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in migrasome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in migrasome ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    polycystin-1-interacting protein 1
    Names
    uncharacterized protein C21orf62 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109052.2NP_001102522.1  polycystin-1-interacting protein 1 precursor

      See identical proteins and their annotated locations for NP_001102522.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000011
      UniProtKB/TrEMBL
      A6JLE4, D3ZJP2
      Related
      ENSRNOP00000094399.1, ENSRNOT00000116851.2
      Conserved Domains (1) summary
      pfam15137
      Location:6211
      DUF4571; Domain of unknown function (DUF4571)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086029.1 Reference GRCr8

      Range
      43793924..43811388 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)