U.S. flag

An official website of the United States government

Links from GEO Profiles

    • Showing Current items.

    Rasd1 ras related dexamethasone induced 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 64455, updated on 9-Dec-2024

    Summary

    Official Symbol
    Rasd1provided by RGD
    Official Full Name
    ras related dexamethasone induced 1provided by RGD
    Primary source
    RGD:619727
    See related
    EnsemblRapid:ENSRNOG00000003348 AllianceGenome:RGD:619727
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable G-protein beta-subunit binding activity. Involved in negative regulation of DNA-templated transcription and nitric oxide mediated signal transduction. Located in nucleus and perinuclear region of cytoplasm. Orthologous to human RASD1 (ras related dexamethasone induced 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Liver (RPKM 60.9), Adrenal (RPKM 22.0) and 9 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Rasd1 in Genome Data Viewer
    Location:
    10q22
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (45265975..45275279, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (44766451..44775773, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (46330361..46339326, complement)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene 5',3'-nucleotidase, mitochondrial Neighboring gene mediator complex subunit 9 Neighboring gene phosphatidylethanolamine N-methyltransferase Neighboring gene DnaJ heat shock protein family (Hsp40) member A1, pseudogene 3 Neighboring gene uncharacterized LOC102549418

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Clone Names

    • MGC116281

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables G-protein beta-subunit binding  
    enables GTP binding  
    enables GTPase activity  
    enables protein binding PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm  
    located_in cytoplasm PubMed 
    located_in cytoplasm PubMed 
    located_in nucleus PubMed 
    located_in perinuclear region of cytoplasm PubMed 
    located_in plasma membrane  
    located_in sarcoplasmic reticulum  

    General protein information

    Preferred Names
    dexamethasone-induced Ras-related protein 1
    Names
    DEXRAS1 (Dexras1)
    RAS, dexamethasone-induced 1
    NP_001257883.1
    XP_008766093.1
    XP_038942720.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001270954.1NP_001257883.1  dexamethasone-induced Ras-related protein 1

      See identical proteins and their annotated locations for NP_001257883.1

      Status: PROVISIONAL

      Source sequence(s)
      BC099136
      UniProtKB/Swiss-Prot
      Q4KLL2, Q9JKF8
      UniProtKB/TrEMBL
      A6HF22
      Related
      ENSRNOP00000004475.4, ENSRNOT00000004475.8
      Conserved Domains (1) summary
      cd04143
      Location:25280
      Rhes_like; Ras homolog enriched in striatum (Rhes) and activator of G-protein signaling 1 (Dexras1/AGS1)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      45265975..45275279 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039086792.2XP_038942720.1  dexamethasone-induced Ras-related protein 1 isoform X1

      UniProtKB/Swiss-Prot
      Q4KLL2, Q9JKF8
      UniProtKB/TrEMBL
      A6HF22
      Conserved Domains (1) summary
      cd04143
      Location:25280
      Rhes_like; Ras homolog enriched in striatum (Rhes) and activator of G-protein signaling 1 (Dexras1/AGS1)
    2. XM_008767871.4XP_008766093.1  dexamethasone-induced Ras-related protein 1 isoform X1

      See identical proteins and their annotated locations for XP_008766093.1

      UniProtKB/Swiss-Prot
      Q4KLL2, Q9JKF8
      UniProtKB/TrEMBL
      A6HF22
      Conserved Domains (1) summary
      cd04143
      Location:25280
      Rhes_like; Ras homolog enriched in striatum (Rhes) and activator of G-protein signaling 1 (Dexras1/AGS1)
    External link. Please review our privacy policy.