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    Luzp2 leucine zipper protein 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100910839, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Luzp2provided by RGD
    Official Full Name
    leucine zipper protein 2provided by RGD
    Primary source
    RGD:6496163
    See related
    EnsemblRapid:ENSRNOG00000021507 AllianceGenome:RGD:6496163
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1563838
    Summary
    Orthologous to human LUZP2 (leucine zipper protein 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward (RPKM 167.8) See more
    Orthologs
    human mouse all
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    Genomic context

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    See Luzp2 in Genome Data Viewer
    Location:
    1q22
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (114733026..115119374)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (105597291..105983605)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (111849494..112067502) , (113419707..113531330)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134484894 Neighboring gene cleavage factor polyribonucleotide kinase subunit 1, pseudogene 1 Neighboring gene uncharacterized LOC120099819 Neighboring gene heat shock protein 90 alpha family class B member 1, pseudogene 1 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC108348964 Neighboring gene solute carrier family 25 member 5, pseudogene 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    leucine zipper protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001432773.1 → NP_001419702.1  leucine zipper protein 2 isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A0A1W2Q6D6, A6KD22

    2. NM_001432774.1 → NP_001419703.1  leucine zipper protein 2 isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A6KD22

    3. NM_001432775.1 → NP_001419704.1  leucine zipper protein 2 isoform 3

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001

    4. NM_001432776.1 → NP_001419705.1  leucine zipper protein 2 isoform 4

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001

    5. NM_001432777.1 → NP_001419706.1  leucine zipper protein 2 isoform 5

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A6KD22

    6. NM_001432778.1 → NP_001419707.1  leucine zipper protein 2 isoform 6

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001

    7. NM_001432779.1 → NP_001419708.1  leucine zipper protein 2 isoform 7

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      114733026..115119374
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039100990.2 → XP_038956918.1  leucine zipper protein 2 isoform X5

      Conserved Domains (1) summary
      COG1196
      Location:21 → 130
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. XM_039100987.2 → XP_038956915.1  leucine zipper protein 2 isoform X1

      Related
      ENSRNOP00000108252.1, ENSRNOT00000128198.1
      Conserved Domains (1) summary
      COG1196
      Location:21 → 208
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    3. XM_008759472.4 → XP_008757694.3  leucine zipper protein 2 isoform X2

      Related
      ENSRNOP00000076227.2, ENSRNOT00000033811.8
      Conserved Domains (1) summary
      COG4942
      Location:19 → 190
      EnvC; Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning]

    4. XM_063278593.1 → XP_063134663.1  leucine zipper protein 2 isoform X4

    5. XM_039100988.2 → XP_038956916.1  leucine zipper protein 2 isoform X3

      Conserved Domains (1) summary
      COG1196
      Location:21 → 208
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    6. XM_039100991.2 → XP_038956919.1  leucine zipper protein 2 isoform X6

      Conserved Domains (1) summary
      COG1196
      Location:6 → 117
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein Strain
    Heading Accession and Version

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