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    Smim10l1 small integral membrane protein 10 like 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100360120, updated on 9-Dec-2024

    Summary

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    Symbol
    Smim10l1provided by RGD
    Full Name
    small integral membrane protein 10 like 1provided by RGD
    Primary source
    RGD:2322729
    See related
    AllianceGenome:RGD:2322729
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Smim10l1b
    Summary
    Predicted to be located in mitochondrion. Orthologous to human SMIM10L1 (small integral membrane protein 10 like 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See Smim10l1 in Genome Data Viewer
    Location:
    4q42
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (168073100..168076291)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (166341699..166345530)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (167218998..167222864)

    Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene taste receptor, type 2, member 103 Neighboring gene large ribosomal subunit protein uL1-like Neighboring gene taste receptor, type 2, member 140 Neighboring gene uncharacterized LOC108350777 Neighboring gene SMR2 protein-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Quantitative high-confidence human mitochondrial proteome and its dynamics in cellular context. Morgenstern M, et al. Cell Metab, 2021 Dec 7. PMID 34800366, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: small integral membrane protein 10-like protein 1
    Names
    small integral membrane protein 10-like 1B
    small integral membrane protein 10-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086022.1 Reference GRCr8

      Range
      168073100..168076291
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017593058.3 → XP_017448547.1  LOW QUALITY PROTEIN: small integral membrane protein 10-like protein 1

      Conserved Domains (1) summary
      pfam15118
      Location:4 → 64
      DUF4560; Domain of unknown function (DUF4560)
    Nucleotide Protein Strain
    Heading Accession and Version

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