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    Taf11l1 TATA-box binding protein associated factor 11 like 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 303433, updated on 9-Dec-2024

    Summary

    Official Symbol
    Taf11l1provided by RGD
    Official Full Name
    TATA-box binding protein associated factor 11 like 1provided by RGD
    Primary source
    RGD:1562272
    See related
    EnsemblRapid:ENSRNOG00000027511 AllianceGenome:RGD:1562272
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1562272
    Summary
    Predicted to enable protein heterodimerization activity. Predicted to be involved in RNA polymerase II preinitiation complex assembly. Predicted to be part of transcription factor TFIID complex. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Taf11l1 in Genome Data Viewer
    Location:
    10q26
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (74278561..74281058, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (73781281..73783163, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (76312308..76314572, complement)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene elongin B like 9 Neighboring gene elongin B like 3 Neighboring gene coilin Neighboring gene tripartite motif-containing 25

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Clone Names

    • AC119015.1

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    contributes_to RNA polymerase II general transcription initiation factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in RNA polymerase II preinitiation complex assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in RNA polymerase II preinitiation complex assembly IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    part_of transcription factor TFIID complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of transcription factor TFIID complex IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    transcription initiation factor TFIID subunit 11-like

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      74278561..74281058 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039087377.2XP_038943305.1  transcription initiation factor TFIID subunit 11-like

      UniProtKB/TrEMBL
      A0A8I6AFP5
      Related
      ENSRNOP00000092523.1, ENSRNOT00000000260.5
      Conserved Domains (1) summary
      pfam04719
      Location:104188
      TAFII28; hTAFII28-like protein conserved region