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    Krcc1 lysine-rich coiled-coil 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 312437, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Krcc1provided by RGD
    Official Full Name
    lysine-rich coiled-coil 1provided by RGD
    Primary source
    RGD:1306495
    See related
    EnsemblRapid:ENSRNOG00000007124 AllianceGenome:RGD:1306495
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1306495
    Summary
    Orthologous to human KRCC1 (lysine rich coiled-coil 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Heart (RPKM 184.5), Kidney (RPKM 169.3) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Krcc1 in Genome Data Viewer
    Location:
    4q32
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (104819958..104832987)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (103261642..103274672)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (99133735..99148236)

    Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene SET and MYND domain containing 1 Neighboring gene low molecular weight phosphotyrosine protein phosphatase-like Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene zinc finger, matrin-type 1 like 1 Neighboring gene uncharacterized LOC134486799 Neighboring gene CD8 subunit beta

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC105762

    General protein information

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    Preferred Names
    lysine-rich coiled-coil protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001009413.2 → NP_001009413.1  lysine-rich coiled-coil protein 1

      See identical proteins and their annotated locations for NP_001009413.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000004
      UniProtKB/Swiss-Prot
      Q5PPL1
      UniProtKB/TrEMBL
      A0A8I6A2K4, A6IA69
      Related
      ENSRNOP00000086295.1, ENSRNOT00000094782.2

    2. NM_001394050.1 → NP_001380979.1  lysine-rich coiled-coil protein 1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000004
      UniProtKB/Swiss-Prot
      Q5PPL1
      UniProtKB/TrEMBL
      A0A8I6A2K4, A6IA69
      Related
      ENSRNOP00000097249.1, ENSRNOT00000103952.2

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086022.1 Reference GRCr8

      Range
      104819958..104832987
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5PPL1.1 GenPept UniProtKB/Swiss-Prot:Q5PPL1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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