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    C5h6orf163 similar to human chromosome 6 open reading frame 163 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 500434, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C5h6orf163provided by RGD
    Official Full Name
    similar to human chromosome 6 open reading frame 163provided by RGD
    Primary source
    RGD:1563056
    See related
    EnsemblRapid:ENSRNOG00000009178 AllianceGenome:RGD:1563056
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1563056
    Summary
    Orthologous to human C6orf163 (chromosome 6 open reading frame 163). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 33.8), Kidney (RPKM 1.9) and 1 other tissue See more
    Orthologs
    human mouse all
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    Genomic context

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    See C5h6orf163 in Genome Data Viewer
    Location:
    5q21
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (54113073..54132787, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (49316784..49329164, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (50210303..50221560, complement)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene arginyl-tRNA synthetase 2, mitochondrial Neighboring gene solute carrier family 35 member A1 Neighboring gene cilia and flagella associated protein 206 Neighboring gene small integral membrane protein 8 Neighboring gene small nucleolar RNA SNORA17

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein C6orf163 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      54113073..54132787 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063288522.1 → XP_063144592.1  uncharacterized protein C6orf163 homolog isoform X2

    2. XM_575796.7 → XP_575796.2  uncharacterized protein C6orf163 homolog isoform X1

      See identical proteins and their annotated locations for XP_575796.2

      UniProtKB/TrEMBL
      D3ZAP6
      Related
      ENSRNOP00000012164.5, ENSRNOT00000012164.8
      Conserved Domains (1) summary
      TIGR02168
      Location:48 → 284
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    3. XM_006238003.5 → XP_006238065.1  uncharacterized protein C6orf163 homolog isoform X2

      See identical proteins and their annotated locations for XP_006238065.1

      Conserved Domains (1) summary
      pfam09731
      Location:23 → 128
      Mitofilin; Mitochondrial inner membrane protein
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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