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    Mt1 metallothionein 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 24567, updated on 9-Dec-2024

    Summary

    Official Symbol
    Mt1provided by RGD
    Official Full Name
    metallothionein 1provided by RGD
    Primary source
    RGD:3117
    See related
    EnsemblRapid:ENSRNOG00000025764 AllianceGenome:RGD:3117
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Mt; Mt1a
    Summary
    Predicted to enable copper ion binding activity and zinc ion binding activity. Involved in response to cadmium ion and response to zinc ion. Predicted to be located in cytosol and lysosome. Predicted to be active in cytoplasm and nucleus. Biomarker of kidney failure; median neuropathy; and transient cerebral ischemia. Orthologous to human MT1A (metallothionein 1A). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Kidney (RPKM 2019.6), Testes (RPKM 875.9) and 6 other tissues See more
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    Genomic context

    See Mt1 in Genome Data Viewer
    Location:
    19p12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 19 NC_086037.1 (10831959..10832975, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 19 NC_051354.1 (10826032..10827048, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 19 NC_005118.4 (11301991..11303007, complement)

    Chromosome 19 - NC_086037.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 12 member 3 Neighboring gene microRNA 138-2 Neighboring gene nucleoporin 93 Neighboring gene metallothionein 2A Neighboring gene metallothionein 3

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables copper ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables metal ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables zinc ion binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in cellular response to cadmium ion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cellular response to cadmium ion ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within cellular response to chromate ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to copper ion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cellular response to zinc ion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within cellular response to zinc ion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to zinc ion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to zinc ion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in detoxification of copper ion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within detoxification of copper ion ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within intracellular monoatomic cation homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in intracellular zinc ion homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within intracellular zinc ion homeostasis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of growth ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of neuron apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within nitric oxide mediated signal transduction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to cadmium ion IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in response to zinc ion IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in lysosome ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    metallothionein-1
    Names
    MT-1
    MT-I
    metallothionein 1a
    metallothionein-I

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_138826.4NP_620181.1  metallothionein-1

      See identical proteins and their annotated locations for NP_620181.1

      Status: PROVISIONAL

      Source sequence(s)
      J00750
      UniProtKB/Swiss-Prot
      P02803
      UniProtKB/TrEMBL
      A0A8I6A7Y9, Q53Z83
      Related
      ENSRNOP00000030623.6, ENSRNOT00000038212.7

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086037.1 Reference GRCr8

      Range
      10831959..10832975 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)