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    Cenpm centromere protein M [ Rattus norvegicus (Norway rat) ]

    Gene ID: 315164, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Cenpmprovided by RGD
    Official Full Name
    centromere protein Mprovided by RGD
    Primary source
    RGD:1307309
    See related
    EnsemblRapid:ENSRNOG00000023262 AllianceGenome:RGD:1307309
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1307309
    Summary
    Predicted to be located in nucleus. Predicted to be part of inner kinetochore. Orthologous to human CENPM (centromere protein M). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Thymus (RPKM 35.5), Spleen (RPKM 28.7) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Cenpm in Genome Data Viewer
    Location:
    7q34
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (115628117..115639401, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (113748026..113759296, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (123464615..123476336, complement)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene shisa family member 8 Neighboring gene TNF receptor superfamily member 13C Neighboring gene small integral membrane protein 45 Neighboring gene uncharacterized LOC108351520 Neighboring gene septin 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    part_of inner kinetochore ISO
    Inferred from Sequence Orthology
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    centromere protein M

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001130504.1 → NP_001123976.1  centromere protein M

      See identical proteins and their annotated locations for NP_001123976.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473950
      UniProtKB/TrEMBL
      A0A8I6AQ90, A6HT51, D4AC25
      Related
      ENSRNOP00000033005.4, ENSRNOT00000036917.7
      Conserved Domains (1) summary
      pfam11111
      Location:1 → 172
      CENP-M; Centromere protein M (CENP-M)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      115628117..115639401 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008765720.4 → XP_008763942.1  centromere protein M isoform X1

      Conserved Domains (1) summary
      pfam11111
      Location:1 → 141
      CENP-M; Centromere protein M (CENP-M)

    2. XM_063263620.1 → XP_063119690.1  centromere protein M isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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