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    LOC100820554 phosphoethanolamine N-methyltransferase [ Glycine max (soybean) ]

    Gene ID: 100820554, updated on 3-Feb-2025

    Summary

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    Gene symbol
    LOC100820554
    Gene description
    phosphoethanolamine N-methyltransferase
    Locus tag
    GLYMA_05G246500v4
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100820554 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2025_01 current Glycine_max_v4.0 (GCF_000004515.6) 5 NC_038241.2 (42048793..42053000)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 5 NC_038241.1 (42009070..42013266)

    Chromosome 5 - NC_038241.2Genomic Context describing neighboring genes Neighboring gene ADP,ATP carrier protein ER-ANT1 Neighboring gene translocon at the outer membrane of chloroplasts 64 Neighboring gene protein C2-DOMAIN ABA-RELATED 4 Neighboring gene protection of telomeres protein 1b-like Neighboring gene small nucleolar RNA snoR113 Neighboring gene SEL-1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequencing and analysis of approximately 40,000 soybean cDNA clones from a full-length-enriched cDNA library. Umezawa T, et al. DNA Res, 2008 Dec. PMID 18927222, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphoethanolamine N-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phosphatidylcholine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphoethanolamine N-methyltransferase
    NP_001348858.1
    XP_040871177.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001361929.1 → NP_001348858.1  phosphoethanolamine N-methyltransferase

      Status: VALIDATED

      Source sequence(s)
      ACUP04001938, AK244770, DB966120
      UniProtKB/TrEMBL
      I1K5B7, I1K5B8
      Conserved Domains (1) summary
      PLN02336
      Location:13 → 488
      PLN02336; phosphoethanolamine N-methyltransferase

    RefSeqs of Annotated Genomes: GCF_000004515.6-RS_2025_01

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038241.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      42048793..42053000
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041015243.1 → XP_040871177.1  phosphoethanolamine N-methyltransferase isoform X1

      UniProtKB/TrEMBL
      I1K5B8
      Conserved Domains (1) summary
      PLN02336
      Location:13 → 517
      PLN02336; phosphoethanolamine N-methyltransferase
    Nucleotide Protein
    Heading Accession and Version

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