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    Muc3 mucin 3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 687030, updated on 9-Dec-2024

    Summary

    Official Symbol
    Muc3provided by RGD
    Official Full Name
    mucin 3provided by RGD
    Primary source
    RGD:3124
    See related
    AllianceGenome:RGD:3124
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Muc3a
    Summary
    Predicted to enable PDZ domain binding activity. Involved in response to Gram-positive bacterium; response to hormone; and response to vitamin A. Located in apical plasma membrane. Used to study colitis. Biomarker of cholangitis; colitis; liver cirrhosis; and otitis media. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Muc3 in Genome Data Viewer
    Location:
    12q12
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (25139076..25175249)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (19527251..19536924)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (22535663..22584775)

    Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene mucin-12-like Neighboring gene mucin-12-like Neighboring gene uncharacterized LOC120095911 Neighboring gene tripartite motif containing 56 Neighboring gene serpin family E member 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in apical plasma membrane PubMed 
    located_in apical plasma membrane  
    located_in external side of plasma membrane  
    located_in microvillus  

    General protein information

    Preferred Names
    mucin 3; uncharacterized protein Muc3
    Names
    Mucin3
    mucin 3, intestinal
    mucin 3A, cell surface associated
    mucin-12
    mucin-17

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001432419.1NP_001419348.1  mucin 3 precursor

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000012

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086030.1 Reference GRCr8

      Range
      25139076..25175249
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063271879.1XP_063127949.1  uncharacterized protein Muc3

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