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    Tmem101 transmembrane protein 101 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 303564, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tmem101provided by RGD
    Official Full Name
    transmembrane protein 101provided by RGD
    Primary source
    RGD:1306490
    See related
    AllianceGenome:RGD:1306490
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1306490
    Summary
    Predicted to be involved in positive regulation of canonical NF-kappaB signal transduction. Predicted to be located in membrane. Orthologous to human TMEM101 (transmembrane protein 101). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Heart (RPKM 80.7), Muscle (RPKM 77.4) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Tmem101 in Genome Data Viewer
    Location:
    10q32.1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (87605300..87609053, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (87105115..87108868, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (90092343..90096096, complement)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120095294 Neighboring gene uncharacterized LOC134480880 Neighboring gene N-acetylglutamate synthase Neighboring gene LSM12 homolog Neighboring gene glucose 6 phosphatase catalytic subunit 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in membrane  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001191650.1NP_001178579.1  transmembrane protein 101

      See identical proteins and their annotated locations for NP_001178579.1

      Status: VALIDATED

      Source sequence(s)
      BC086567, DY310329
      UniProtKB/TrEMBL
      A6HJG8, G3V8U1, Q5RJN6
      Conserved Domains (1) summary
      pfam15111
      Location:8256
      TMEM101; TMEM101 protein family

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      87605300..87609053 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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