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    WNK1 serine/threonine-protein kinase WNK1 [ Glycine max (soybean) ]

    Gene ID: 100272198, updated on 3-Feb-2025

    Summary

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    Gene symbol
    WNK1
    Gene description
    serine/threonine-protein kinase WNK1
    Locus tag
    GLYMA_20G228000v4
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
    Also known as
    GmWNK1
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    Genomic context

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    See WNK1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2025_01 current Glycine_max_v4.0 (GCF_000004515.6) 20 NC_038256.2 (46196704..46200455)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 20 NC_038256.1 (46257693..46261444)

    Chromosome 20 - NC_038256.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100820537 Neighboring gene zeta-carotene desaturase, chloroplastic/chromoplastic Neighboring gene uncharacterized LOC100305568 Neighboring gene guanosine deaminase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Overexpression of the soybean GmWNK1 altered the sensitivity to salt and osmotic stress in Arabidopsis. Wang Y, et al. J Plant Physiol, 2011 Dec 15. PMID 21925762
    2. The soybean root-specific protein kinase GmWNK1 regulates stress-responsive ABA signaling on the root system architecture. Wang Y, et al. Plant J, 2010 Oct. PMID 20735771
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. role in the regulation of root system architecture
      Title: The soybean root-specific protein kinase GmWNK1 regulates stress-responsive ABA signaling on the root system architecture.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein kinase WNK1
    Names
    with no lysine kinase 1
    NP_001364052.1
    XP_014627692.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001377123.1 → NP_001364052.1  serine/threonine-protein kinase WNK1

      Status: VALIDATED

      Source sequence(s)
      ACUP04007346
      UniProtKB/TrEMBL
      C0M0P2, I1NIT6
      Conserved Domains (2) summary
      cd13983
      Location:22 → 281
      STKc_WNK; Catalytic domain of the Serine/Threonine kinase, With No Lysine (WNK) kinase
      pfam12202
      Location:374 → 431
      OSR1_C; Oxidative-stress-responsive kinase 1 C-terminal domain

    RefSeqs of Annotated Genomes: GCF_000004515.6-RS_2025_01

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038256.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      46196704..46200455
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014772206.3 → XP_014627692.1  serine/threonine-protein kinase WNK1 isoform X1

      UniProtKB/TrEMBL
      A0A0R0ERC6, A0A0R0ERV9
      Conserved Domains (2) summary
      cd13983
      Location:22 → 281
      STKc_WNK; Catalytic domain of the Serine/Threonine kinase, With No Lysine (WNK) kinase
      pfam12202
      Location:374 → 431
      OSR1_C; Oxidative-stress-responsive kinase 1 C-terminal domain

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001249029.1: Suppressed sequence

      Description
      NM_001249029.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
    Nucleotide Protein
    Heading Accession and Version

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