U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    OAS-TL7 cysteine synthase [ Glycine max (soybean) ]

    Gene ID: 100101909, updated on 3-Feb-2025

    Summary

    Go to the top of the page Help
    Gene symbol
    OAS-TL7
    Gene description
    cysteine synthase
    Locus tag
    GLYMA_20G228900v4
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See OAS-TL7 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2025_01 current Glycine_max_v4.0 (GCF_000004515.6) 20 NC_038256.2 (46241464..46246834)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 20 NC_038256.1 (46302453..46307823)

    Chromosome 20 - NC_038256.2Genomic Context describing neighboring genes Neighboring gene 5'-3' exoribonuclease 4 Neighboring gene ribosome biogenesis regulatory protein homolog Neighboring gene cysteine synthase Neighboring gene protein MON2 homolog

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Overexpression of a soybean O-acetylserine (thiol) lyase-encoding gene GmOASTL4 in tobacco increases cysteine levels and enhances tolerance to cadmium stress. Ning H, et al. Biotechnol Lett, 2010 Apr. PMID 19953300
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cysteine biosynthetic process from serine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    cysteine synthase
    NP_001235267.2
    XP_006605280.1
    XP_006605281.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001248338.2 → NP_001235267.2  cysteine synthase

      Status: VALIDATED

      Source sequence(s)
      ACUP04007346, BT094324, GR854307
      UniProtKB/TrEMBL
      A3RM06, I1NIU6
      Conserved Domains (1) summary
      PLN02565
      Location:4 → 323
      PLN02565; cysteine synthase

    RefSeqs of Annotated Genomes: GCF_000004515.6-RS_2025_01

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038256.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      46241464..46246834
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006605218.4 → XP_006605281.1  cysteine synthase isoform X1

      See identical proteins and their annotated locations for XP_006605281.1

      UniProtKB/TrEMBL
      A3RM06, I1NIU6
      Conserved Domains (1) summary
      PLN02565
      Location:4 → 323
      PLN02565; cysteine synthase

    2. XM_006605217.4 → XP_006605280.1  cysteine synthase isoform X1

      See identical proteins and their annotated locations for XP_006605280.1

      UniProtKB/TrEMBL
      A3RM06, I1NIU6
      Conserved Domains (1) summary
      PLN02565
      Location:4 → 323
      PLN02565; cysteine synthase
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases